miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|158999101|gb|EX949795.1|EX949795 GGCAGGATACTGCTTATCTCCATTTTGGCAAGCATTACTTGAGAGATTGTTATATCGAAGGCAGTGTTGATTTTATTTTT
GGCAATGCTACAGCATTGTTTGAGCATTGTCACATTCACTGCAAATCTGCAGGTTTTATTACTGCACAATCGCGGCAATC
AGCTCAAGAAACAACAGGCTATGTATTTTTGAGGTGTGTGATTACTGGGAACGGTGAAACAGGCTATATGCATCTTGGAC
GTCCGTGGAAACCATTTGGAAGAGTGGTTT




Most similar to sp|Q9LVQ0|PME31_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9LVQ0|PME31_ARATH Pectinesterase 31 OS=Arabidopsis thaliana
           GN=PME31 PE=1 SV=1
          Length = 317

 Score =  169 bits (428), Expect = 5e-42
 Identities = 75/89 (84%), Positives = 83/89 (93%)
 Frame = +3

Query: 3   QDTAYLHFGKHYLRDCYIEGSVDFIFGNATALFEHCHIHCKSAGFITAQSRQSAQETTGY 182
           QDT YLH GK YL+DCYIEGSVDFIFGN+TAL EHCHIHCKS GFITAQSR+S+QE+TGY
Sbjct: 143 QDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQESTGY 202

Query: 183 VFLRCVITGNGETGYMHLGRPWKPFGRVV 269
           VFLRCVITGNG++GYM+LGRPW PFGRVV
Sbjct: 203 VFLRCVITGNGQSGYMYLGRPWGPFGRVV 231